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Research Catalogue Analytics Hub Biobank Samples
The Cancer Genome Atlas (TCGA) International Cancer Genome Consortium (ICGC) The Cancer Cell Line Encyclopedia (CCLE)
Genomics England (GEL) Spatial Characterisation
User Guide
  1. BCNB Data

Genomics England

Powered by SNPnexus


Summary
Clinical Summary Genomics Cohort Browser Details
Overview Help
Sex
Survival Status
Ethnicity
ER Status
HER2 Status
Survival Time (Years)
Age at Diagnosis
Genetic Ancestry
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Cohort Summary Variant Identification Drug Prediction Interactions & Pathways
Help
Oncoplot help
LolliPlot help
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Somatic Interactions help
TCGA Compare help
Cancer Genome Interpreter (CGI) help
CGI Biomarker CGI Bioactivity
Gene Protein Alteration Alteration Match Drug Effect Tumour Evidence
Variation Gene Transcript Protein Alteration Consequence Tumour Driver Oncogenic Classification
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Cancer Genome Interpreter (CGI)
Drug-Gene Interactions help

Focus the search to a gene of interest:

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Gene Interaction Source Interaction Types Drug Claim Primary Name Drug Name ChEMBL ID
Oncogenic Pathways help
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Oncogenic Pathways
Interaction Networks help
Legend:
  • Phenotype
  • Protein
  • Drug
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Select a gene to see its drug/phenotype/protein interactions

Reactome Pathways help

All significant pathways (p<0.05) in the selected cohort are presented in the Voronoi interactive plot, with colour intensity representing the number of patients affected
Click here to show visualisation below or here to open the visualisation in a new window

There are patients available from the BCN Biobank that match the selected/a subset of the criteria. Explore the data available for these patients using our Cohort Browser.

Researchers can request samples from BCNB website to support their research activities.

*Based on your filtering criteria you can view the number of available patients and associated samples in BCNB

In order to apply for samples, please use the BCNB Request System to submit an Expression of interest (EOI) form.

If you require further details please contact us at tissue.bank@breastcancernow.org

Patient ID Age at Diagnosis Sex Ethnicity Menopausal Status Family History Family History Relative BRCA Status Definition ER PR HER2 Tumour Grade Tumour Size Lymph Node Survival Status Followup (Years) Recurrence Metastasis Genetic Ancestry Location hidden
1007 77 female Not specified postmenopausal yes yes unknown primary Negative Negative Negative Grade 3 20 Negative Alive 11.3 NA NA European Barts LP3001415-DNA_H09
1203 43 female White - British premenopausal yes no unknown primary Negative Negative Negative Grade 3 27 Negative Alive 8.7 NA NA European Barts LP3001381-DNA_F01
1506 46 female White - British postmenopausal yes yes BRCA1 primary Negative Negative Negative Grade 3 35 Negative Alive 9.2 NA NA European Barts LP3001381-DNA_C01
1633 46 female White - Any other background premenopausal yes no BRCA1 primary Negative Negative Negative Grade 3 22 Negative Alive 7.8 NA NA European Barts LP3001415-DNA_G10
1666 66 female White - British postmenopausal yes yes unknown primary Negative Negative Negative Grade 3 13 Negative Alive 8.5 NA NA European Barts LP3001415-DNA_C09
1759 62 female White - Any other background postmenopausal no no unknown primary Negative Negative Negative Grade 3 18 Positive Alive 6.6 NA NA European Barts LP3001415-DNA_C08
1903 76 female White - British postmenopausal unknown unknown unknown primary Negative Negative Negative Grade 3 28 Negative Alive 8.2 NA NA European Barts LP3001381-DNA_A01
1908 42 female White - Any other background premenopausal yes no BRCA1 primary Negative Negative Negative Grade 3 23 Positive Alive 8.3 NA NA European Barts LP3001415-DNA_H08
1979 55 female Black or Black British - Caribbean not recorded yes yes BRCA1 primary Negative Negative Negative Grade 3 6 Negative Alive 7.8 NA NA African Barts LP3001415-DNA_C10
2163 39 female White - Any other background premenopausal no no unknown primary Negative Negative Negative Grade 3 60 Positive Alive 7.3 NA NA European Barts LP3001381-DNA_A02
2536 66 female Black or Black British - Caribbean postmenopausal yes no unknown primary Negative Negative Negative Grade 2 16 + 7 Negative Alive 4.5 NA NA African Barts LP3001415-DNA_A07
2609 59 female White postmenopausal yes no unknown primary Negative Negative Negative Grade 3 58 Negative Alive 5.9 NA NA Admix Barts LP3001415-DNA_D07
2680 50 female White - Any other background perimenopausal no no unknown primary Negative Negative Negative Grade 3 19 Negative Alive 3.9 NA NA American Barts LP3001415-DNA_B09
2753 74 female Black or Black British - Caribbean postmenopausal unknown unknown unknown primary Negative Negative Negative Grade 3 42 Positive Alive 5.3 NA NA African Barts LP3001415-DNA_A08
2819 44 female Asian or Asian British - Indian premenopausal no no BRCA1 primary Negative Negative Negative Grade 3 22 Negative Alive 4.3 NA NA South Asian Barts LP3001381-DNA_E01
2842 51 female Asian or Asian British - Bangladeshi premenopausal yes yes unknown primary Negative Negative Negative Grade 3 13 Negative Alive 9.8 NA CL South Asian Barts LP3001415-DNA_A09
2953 66 female White - British postmenopausal no no unknown primary Negative Negative Negative Grade 3 17 Negative Alive 4.7 NA NA European Barts LP3001415-DNA_A10
LS12-098 45 female White - British premenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 2 9 Negative Alive 5.6 NA NA European Leeds LP3001415-DNA_C02
LS12-122 78 female White - British postmenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 3 17 Negative Alive 5.5 NA NA European Leeds LP3001415-DNA_G07
LS12-128 41 female White - British premenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 3 16 Negative Alive 5.3 NA NA European Leeds LP3001415-DNA_F01
LS12-379 68 female White - British postmenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 3 40 Negative Alive 5.3 yes yes European Leeds LP3001415-DNA_A02
LS12-417 64 female White - British postmenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 2 1.5 NA Alive 4.4 NA NA European Leeds LP3001415-DNA_B11
LS13-03399 61 female White - British postmenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 3 19 Negative Alive 4.1 NA NA European Leeds LP3001415-DNA_B02
LS15-02515 48 female White - British perimenopausal unknown unknown unknown primary Negative Negative Negative Grade 3 19 Negative Alive 2.33 NA NA European Leeds LP3001415-DNA_A03
LS15-02568 62 female White - British postmenopausal yes no unknown recurrence Negative Negative Negative Grade 3 9 Negative Alive 3.0 NA NA European Leeds LP3001415-DNA_G01
LS16-4577 51 female White - British perimenopausal none recorded none recorded unknown primary Negative Negative Negative Grade 3 27 Positive Alive 1.08 NA NA European Leeds LP3001415-DNA_B03
LS16-4682 60 female White - British postmenopausal yes yes unknown primary Negative Negative Negative Grade 3 24 Positive Alive 0.75 NA NA European Leeds LP3001415-DNA_B04
LS17-4826 42 female White - British not recorded yes no unknown primary Negative Negative Negative Grade 3 42 Negative Alive 0.67 NA NA European Leeds LP3001415-DNA_B05
N12/001605 59 female White - British unknown unknown unknown NA primary Negative Negative Negative Grade 3 13 Negative Alive 6.42 NA NA European Nottingham LP3001415-DNA_G09
N12/001734 37 female White - British unknown not recorded not recorded unknown primary Positive Negative Negative Grade 3 20 Negative Alive 5.0 NA NA European Nottingham LP3001415-DNA_D10
N12/003761 50 female White - British postmenopausal not recorded not recorded unknown primary Negative Negative Negative Grade 3 25 Negative Alive 5.67 NA NA European Nottingham LP3001415-DNA_H06
N13/000457 61 female White - British unknown no no unknown primary Positive Negative Negative Grade 2 13 Negative Alive 6.33 NA CL European Nottingham LP3001381-DNA_D01
N13/000560 49 female White - British postmenopausal yes yes negative contralateral Negative Negative Negative Grade 3 16 Positive Alive 6.0 NA yes European Nottingham LP3001415-DNA_E09
N13/005968 45 female White - British premenopausal yes yes BRCA1 primary Negative Negative Negative Grade 3 26 Negative Alive 5.58 NA NA European Nottingham LP3001415-DNA_A06
N14/001950 71 female White - British unknown unknown unknown unknown primary Negative Negative Negative Grade 3 31 Negative Alive 3.25 NA NA European Nottingham LP3001415-DNA_E08
N17/008421 51 female White - British unknown yes yes negative primary Negative Negative Negative Grade 3 27 Positive Alive 2.17 NA NA European Nottingham LP3001415-DNA_C07

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