Publicly Available Data
Powered by SNPnexus
Explore genomic and transcriptomic data from publicly available initiatives by selecting one of the projects below.
TCGA
The Cancer Genome Atlas (TCGA) is a landmark cancer genomics initiative that molecularly characterised primary tumours and matched normal samples across 33 cancer types. Currently, genomic and transcriptomic data from 1,093 donors are available for analysis. This includes genomic data from 971 primary and metastatic samples, and transcriptomic data from 1,212 primary, metastatic and cancer-adjacent samples.
ICGC
The International Cancer Genome Consortium (ICGC), launched in 2008, was a global initiative aimed at building a comprehensive catalogue of genomic data from 25,000 tumours (the 25k Initiative). Currently, mRNA expression and mutation data are available for analysis.
CCLE
The Cancer Cell Line Encyclopedia (CCLE) is dedicated to the genetic characterisation of a large panel of human cancer cell lines. A compilation of mRNA expression and mutation data are available for analysis.