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Research Catalogue Analytics Hub Biobank Samples
The Cancer Genome Atlas (TCGA) International Cancer Genome Consortium (ICGC) The Cancer Cell Line Encyclopedia (CCLE)
Genomics England (GEL) Spatial Characterisation
User Guide
  1. Publicly Available Data

The Cancer Cell Line Encyclopedia

Powered by SNPnexus


Summary
Clinical Summary Genomics Transcriptomics Cohort Browser Details
Overview Help
Disease Type
ER Status
PR Status
HER2 Status
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Cohort Summary Variant Identification
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Genomics Summary
Oncoplot help
Oncoplot
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PCA Gene Expression Correlation
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Scatterplot of Two main Principal Components

Click on legend to highlight trace

Scatterplot of Three main Principal Components

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Box Plot

Bar Plot

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There are patients available from the BCN Biobank that match the selected/a subset of the criteria. Explore the data available for these patients using our Cohort Browser.

Researchers can request samples from BCNB website to support their research activities.

*Based on your filtering criteria you can view the number of available patients and associated samples in BCNB

In order to apply for samples, please use the BCNB Request System to submit an Expression of interest (EOI) form.

If you require further details please contact us at tissue.bank@breastcancernow.org

Cell line Age at Diagnosis Sex Ethnicity Cell type ER PR HER2 Tissue Disease
SUM149PT NA NA NA NA negative negative negative NA ductal carcinoma
SUM159PT NA NA NA NA negative negative negative NA anaplastic carcinoma
SUM229PE NA NA NA NA negative negative negative derived from metastatic site:pleural effusion NA
HCC1143 52.0 female caucasian epithelial NA NA negative mammary gland;duct ductal carcinoma
HCC1395 43.0 female caucasian epithelial;lymphoblast NA NA negative breast;duct ductal carcinoma
HMC18 NA female NA NA negative NA negative metastasis carcinoma
HS274T NA female NA NA NA NA NA fibroblast NA
HS578T 74.0 female caucasian epithelial negative NA NA breast carcinoma
JIMT1 62.0 female NA NA negative NA positive metastasis ductal carcinoma
MDAMB415 38.0 female caucasian NA NA NA NA derived from metastatic site:pleural effusion adenocarcinoma
MDAMB436 43.0 female caucasian NA NA NA NA derived from metastatic site:pleural effusion adenocarcinoma
ZR751 63.0 female caucasian epithelial positive NA NA derived from metastatic site:ascites ductal carcinoma
AU565 43.0 female caucasian NA NA NA positive derived from metastitic site:malignant pleural effusion adenocarcinoma
BT20 74.0 female caucasian epithelial negative NA NA breast carcinoma
BT474 60.0 female caucasian epithelial positive NA positive breast;duct ductal carcinoma
BT483 23.0 female caucasian epithelial positive NA negative breast ductal carcinoma
CAL120 43.0 female NA NA negative NA negative derived from metastatic site:pleural effusion adenocarcinoma
CAL51 45.0 female NA NA negative NA negative derived from metastatic site:pleural effusion carcinoma
CAL851 35.0 female NA NA negative NA negative primary galactophoric breast adenocarcinoma
CAMA1 51.0 female caucasian epithelial positive NA negative derived from metastatic site:pleural effusion adenocarcinoma
DU4475 70.0 female caucasian carcinoma;skin negative NA negative derived from metastatic site:skin carcinoma NA
EFM192A 46.0 female NA NA positive NA positive derived from metastatic site:pleural effusion adenocarcinoma
EFM19 50.0 female caucasian NA positive NA negative derived from metastatic site:pleural effusion ductal carcinoma
HCC1187 41.0 female caucasian epithelial NA NA negative breast ductal carcinoma
HCC1419 42.0 female hispanic epithelial negative negative NA breast ductal carcinoma
HCC1428 49.0 female caucasian epithelial NA NA negative derived from metastatic site:adenocarcinoma and pleural effusion adenocarcinoma
HCC1500 32.0 female black epithelial positive positive negative gland;duct ductal carcinoma
HCC1569 70.0 female black epithelial negative negative positive breast metaplastic carcinoma
HCC1599 44.0 female caucasian epithelial;lymphoblast negative negative negative breast;duct ductal carcinoma
HCC1937 23.0 female caucasian epithelial;lymphoblast negative negative negative breast;duct ductal carcinoma
HCC1954 61.0 female east Indian epithelial negative negative positive breast;duct ductal carcinoma
HCC202 82.0 female caucasian epithelial negative negative positive gland;duct ductal carcinoma
HCC2157 48.0 female black epithelial negative negative positive gland;breast ductal carcinoma
HCC38 50.0 female caucasian epithelial negative negative negative breast;duct ductal carcinoma
HCC70 49.0 female black epithelial NA NA negative breast;duct ductal carcinoma
HDQP1 50.0 female caucasian NA negative negative negative primary ductal carcinoma
MCF7 69.0 female caucasian epithelial positive NA NA derived from metastatic site:pleural effusion adenocarcinoma
MDAMB134VI 47.0 female caucasian epithelial positive NA negative derived from metastatic site:pleural effusion ductal carcinoma
MDAMB157 44.0 female black epithelial negative NA negative breast;medulla medulallary carcinoma
MDAMB175VII 56.0 female black epithelial negative NA negative derived from metastatic site:pleural effusion ductal carcinoma
MDAMB231 51.0 female caucasian epithelial negative NA negative derived from metastatic site:pleural effusion adenocarcinoma
MDAMB361 40.0 female caucasian epithelial positive NA positive derived from metastatic site:brain adenocarcinoma
MDAMB453 48.0 female caucasian epithelial negative NA negative derived from metastatic site:pericardial effusion metastatic carcinoma
T47D 54.0 female NA epithelial positive positive NA derived from metastatic site:pleural effusion ductal carcinoma
UACC812 43.0 female NA epithelial negative negative positive breast ductal carcinoma
UACC893 57.0 female caucasian epithelial negative negative positive breast ductal carcinoma
BT549 72.0 female caucasian epithelial negative NA negative breast ductal carcinoma
CAL148 58.0 female french NA negative NA negative derived from metastatic site:pleural effusion ductal carcinoma
COLO824 52.0 female NA NA NA NA NA derived from metastatic site:pleural effusion carcinoma
EVSAT NA female NA NA negative positive NA derived from metastatic site:ascitic effusion carcinoma
HCC1806 60.0 female black epithelial negative negative negative breast acantholytic squamous cell carcinoma
HCC2218 38.0 female caucasian epithelial;lymphoblast negative NA positive breast;duct ductal carcinoma
MDAMB330 43.0 female caucasian epithelial NA NA NA derived from metastatic site:pleural effusion infiltrating lobular carcinoma
MDAMB468 51.0 female black epithelial negative NA negative derived from metastatic site:pleural effusion adenocarcinoma
MFM223 NA female NA NA negative NA negative metastasis NA
MRKNU1 NA NA NA NA NA NA NA breast carcinoma
OCUBM NA NA NA NA NA NA NA breast carcinoma
YMB1E NA NA NA NA NA NA NA breast ductal carcinoma
ZR7530 47.0 female black epithelial NA NA NA derived from metastatic site:ascites ductal carcinoma
HMEL NA NA NA NA NA NA NA engineered breast NA
KPL1 NA female japanese NA positive negative negative derived from metastatic site:pleural effusion ductal carcinoma
SKBR3 43.0 female caucasian epithelial NA NA positive derived from metastatic site:pleural effusion adenocarcinoma

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